GOMo Sequence Databases

Categories

Databases

Single Species

Danio rerio (Zebrafish)

1000 bps upstream - 200 bps downstream (-1000 to 199) for Danio rerio.

Drosophila Melanogaster (Fruit fly)

1000 bps upstream - 200 bps downstream (-1000 to 199) for Drosophila melanogaster.

Gallus Gallus (Chicken)

2000 bps upstream (-2000 to 0) for Gallus Gallus.

Rattus norvegicus (Rat)

1000 bps upstream - 200 bps downstream (-1000 to 199) for Rattus norvegicus.

Schizosaccharomyces pombe

1000 bps upstream - 200 bps downstream (-1000 to 199) for S.pombe.

Multiple Species

Arabidopsis thaliana (Plant)

1000 bps upstream - 200 bps downstream (-1000 to 199) for Arabidopsis thaliana. This dataset was kindly provided by Bartlomiej Przychodzen and Sandra Smieszek.

Comparative Species
  • Oryza sativa (Rice)
  • Populus trichocarpa (Poplar)
  • Sorghum brachupodium
  • Brachypodium distachyon (purple false brome)

E.coli K12

1000 bps upstream of the first gene in the operon 200 bps downstream (-1000 to 199) for E.coli K12

Comparative Species
  • E.coli CTF073
  • Salmonella enterica serovar Typhi Ty2
  • Yersinia pestis CO92

Homo sapiens (Human)

1000 bps upstream - 200 bps downstream (-1000 to 199) for Homo sapiens.

Comparative Species
  • Mus musculus (Mouse)
  • Canis familiaris (Dog)
  • Equus caballus (Horse)

Mus musculus (Mouse)

1000 bps upstream - 200 bps downstream (-1000 to 199) for Mus musculus.

Comparative Species
  • Canis familiaris (Dog)
  • Rattus Norvegicus (Rat)
  • Equus caballus (Horse)
  • Homo sapiens (Human)

Saccharomyces cerevisiae (yeast)

1000 bps upstream - 200 bps downstream (-1000 to 199) for S.cerevisiae.

Comparative Species
  • S. bayanus
  • S. mikatae
  • S. paradoxus