******************************************************************************** MAST - Motif Alignment and Search Tool ******************************************************************************** MAST version 5.5.3 (Release date: Fri Jun 9 08:12:01 2023 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MAST software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Michael Gribskov, "Combining evidence using p-values: application to sequence homology searches", Bioinformatics, 14(48-54), 1998. ******************************************************************************** ******************************************************************************** DATABASE AND MOTIFS ******************************************************************************** DATABASE adh.faa (peptide) Last updated on Mon Aug 16 16:20:49 2021 Database contains 33 sequences, 9996 residues MOTIFS adh.meme (peptide) MOTIF ID ALT ID WIDTH BEST POSSIBLE MATCH ----- ----------------------------- ------ ----- ------------------- 1 KVALVTGASSGIGKATAKALAKEGAKVVL MEME-1 29 KVVLITGCSSGIGKATAKHLHKEGAKVVV 2 SAYSASKAAVEGLTRSLALELAPYGIRVN MEME-2 29 SVYCASKFAVRMLTRSMAMEYAPHGIRVN PAIRWISE MOTIF CORRELATIONS: MOTIF 1 ----- ----- 2 0.30 No overly similar pairs (correlation > 0.60) found. Random model letter frequencies (from non-redundant database): A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058 L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064 W 0.013 Y 0.033 ******************************************************************************** ******************************************************************************** SECTION I: HIGH-SCORING SEQUENCES ******************************************************************************** - Each of the following 33 sequences has E-value less than 10. - The E-value of a sequence is the expected number of sequences in a random database of the same size that would match the motifs as well as the sequence does and is equal to the combined p-value of the sequence times the number of sequences in the database. - The combined p-value of a sequence measures the strength of the match of the sequence to all the motifs and is calculated by o finding the score of the single best match of each motif to the sequence (best matches may overlap), o calculating the sequence p-value of each score, o forming the product of the p-values, o taking the p-value of the product. - The sequence p-value of a score is defined as the probability of a random sequence of the same length containing some match with as good or better a score. - The score for the match of a position in a sequence to a motif is computed by by summing the appropriate entry from each column of the position-dependent scoring matrix that represents the motif. - Sequences shorter than one or more of the motifs are skipped. - The table is sorted by increasing E-value. ******************************************************************************** SEQUENCE NAME DESCRIPTION E-VALUE LENGTH ------------- ----------- -------- ------ YRTP_BACSU HYPOTHETICAL 25.3 KD PROTE... 2.5e-35 238 BUDC_KLETE ACETOIN(DIACETYL) REDUCTAS... 3.9e-35 241 HDE_CANTR HYDRATASE-DEHYDROGENASE-EP... 2.5e-32 906 AP27_MOUSE ADIPOCYTE P27 PROTEIN (AP27) 6.8e-32 244 HDHA_ECOLI 7-ALPHA-HYDROXYSTEROID DEH... 2.3e-31 255 DHII_HUMAN CORTICOSTEROID 11-BETA-DEH... 4.3e-31 292 FIXR_BRAJA FIXR PROTEIN 1.2e-30 278 DHGB_BACME GLUCOSE 1-DEHYDROGENASE B ... 2e-30 262 YINL_LISMO HYPOTHETICAL 26.8 KD PROTE... 7.9e-30 248 RIDH_KLEAE RIBITOL 2-DEHYDROGENASE (E... 8.6e-30 249 NODG_RHIME NODULATION PROTEIN G (HOST... 4e-29 245 DHMA_FLAS1 N-ACYLMANNOSAMINE 1-DEHYDR... 6.1e-29 270 HMTR_LEIMA no comment 1.8e-28 287 2BHD_STREX 20-BETA-HYDROXYSTEROID DEH... 2.1e-28 255 FVT1_HUMAN no comment 1.7e-27 332 DHB2_HUMAN no comment 2.6e-27 387 ENTA_ECOLI 2,3-DIHYDRO-2,3-DIHYDROXYB... 2.9e-27 248 BDH_HUMAN D-BETA-HYDROXYBUTYRATE DEH... 1.3e-26 343 BA72_EUBSP 7-ALPHA-HYDROXYSTEROID DEH... 2.8e-26 249 3BHD_COMTE 3-BETA-HYDROXYSTEROID DEHY... 1.1e-25 253 GUTD_ECOLI SORBITOL-6-PHOSPHATE 2-DEH... 1.3e-25 259 DHB3_HUMAN no comment 2e-25 310 LIGD_PSEPA C ALPHA-DEHYDROGENASE (EC ... 3.6e-23 305 DHES_HUMAN ESTRADIOL 17 BETA-DEHYDROG... 4.6e-23 327 RFBB_NEIGO no comment 2.6e-20 346 BPHB_PSEPS BIPHENYL-CIS-DIOL DEHYDROG... 9.8e-20 275 DHCA_HUMAN no comment 1.6e-18 276 ADH_DROME ALCOHOL DEHYDROGENASE (EC ... 6.3e-16 255 PCR_PEA no comment 4.2e-14 399 YURA_MYXXA no comment 6.6e-14 258 MAS1_AGRRA no comment 3.8e-12 476 FABI_ECOLI no comment 2.9e-09 262 CSGA_MYXXA no comment 8.1e-09 166 ******************************************************************************** ******************************************************************************** SECTION II: MOTIF DIAGRAMS ******************************************************************************** - The ordering and spacing of all non-overlapping motif occurrences are shown for each high-scoring sequence listed in Section I. - A motif occurrence is defined as a position in the sequence whose match to the motif has POSITION p-value less than 0.0001. - The POSITION p-value of a match is the probability of a single random subsequence of the length of the motif scoring at least as well as the observed match. - For each sequence, all motif occurrences are shown unless there are overlaps. In that case, a motif occurrence is shown only if its p-value is less than the product of the p-values of the other (lower-numbered) motif occurrences that it overlaps. - The table also shows the E-value of each sequence. - Spacers and motif occurences are indicated by o -d- `d' residues separate the end of the preceding motif occurrence and the start of the following motif occurrence o [n] occurrence of motif `n' with p-value less than 0.0001. ******************************************************************************** SEQUENCE NAME E-VALUE MOTIF DIAGRAM ------------- -------- ------------- YRTP_BACSU 2.5e-35 6-[1]-117-[2]-57 BUDC_KLETE 3.9e-35 2-[1]-118-[2]-63 HDE_CANTR 2.5e-32 8-[1]-123-[2]-133-[1]-113-[2]-237-[1]-147 AP27_MOUSE 6.8e-32 7-[1]-110-[2]-69 HDHA_ECOLI 2.3e-31 11-[1]-116-[2]-70 DHII_HUMAN 4.3e-31 34-[1]-117-[2]-83 FIXR_BRAJA 1.2e-30 36-[1]-121-[2]-63 DHGB_BACME 2e-30 7-[1]-121-[2]-76 YINL_LISMO 7.9e-30 5-[1]-117-[2]-68 RIDH_KLEAE 8.6e-30 14-[1]-114-[2]-63 NODG_RHIME 4e-29 6-[1]-114-[2]-67 DHMA_FLAS1 6.1e-29 14-[1]-119-[2]-79 HMTR_LEIMA 1.8e-28 6-[1]-155-[2]-68 2BHD_STREX 2.1e-28 6-[1]-114-[2]-77 FVT1_HUMAN 1.7e-27 32-[1]-122-[2]-120 DHB2_HUMAN 2.6e-27 82-[1]-118-[2]-129 ENTA_ECOLI 2.9e-27 5-[1]-107-[2]-78 BDH_HUMAN 1.3e-26 55-[1]-121-[2]-109 BA72_EUBSP 2.8e-26 6-[1]-119-[2]-66 3BHD_COMTE 1.1e-25 6-[1]-113-[2]-76 GUTD_ECOLI 1.3e-25 2-[1]-120-[2]-79 DHB3_HUMAN 2e-25 48-[1]-118-[2]-86 LIGD_PSEPA 3.6e-23 6-[1]-119-[2]-122 DHES_HUMAN 4.6e-23 2-[1]-50-[1]-42-[2]-146 RFBB_NEIGO 2.6e-20 6-[1]-127-[2]-155 BPHB_PSEPS 9.8e-20 5-[1]-116-[2]-96 DHCA_HUMAN 1.6e-18 4-[1]-157-[2]-57 ADH_DROME 6.3e-16 6-[1]-114-[2]-77 PCR_PEA 4.2e-14 86-[1]-284 YURA_MYXXA 6.6e-14 157-[2]-72 MAS1_AGRRA 3.8e-12 245-[1]-115-[2]-58 FABI_ECOLI 2.9e-09 6-[1]-121-[2]-77 CSGA_MYXXA 8.1e-09 85-[2]-52 ******************************************************************************** ******************************************************************************** SECTION III: ANNOTATED SEQUENCES ******************************************************************************** - The positions and p-values of the non-overlapping motif occurrences are shown above the actual sequence for each of the high-scoring sequences from Section I. - A motif occurrence is defined as a position in the sequence whose match to the motif has POSITION p-value less than 0.0001 as defined in Section II. - For each sequence, the first line specifies the name of the sequence. - The second (and possibly more) lines give a description of the sequence. - Following the description line(s) is a line giving the length, combined p-value, and E-value of the sequence as defined in Section I. - The next line reproduces the motif diagram from Section II. - The entire sequence is printed on the following lines. - Motif occurrences are indicated directly above their positions in the sequence on lines showing o the motif number of the occurrence, o the position p-value of the occurrence, o the best possible match to the motif, and o columns whose match to the motif has a positive score (indicated by a plus sign). ******************************************************************************** YRTP_BACSU HYPOTHETICAL 25.3 KD PROTEIN IN RTP 5'REGION (ORF238) LENGTH = 238 COMBINED P-VALUE = 7.60e-37 E-VALUE = 2.5e-35 DIAGRAM: 6-[1]-117-[2]-57 [1] 4.9e-20 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++++++++++++++ ++ + 1 MQSLQHKTALITGGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEVKALGVKAAFAAADVKDADQVNQAVA [2] 4.0e-24 SVYCASKFAVRMLTRSMAMEYAPHGIRVN ++++++++++ ++++++++++++++++++ 151 VTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIELNLTDGNPEKVMQPEDLAEYMVAQLKLDPR BUDC_KLETE ACETOIN(DIACETYL) REDUCTASE (EC 1.1.1.5) (ACETOIN DEHYDROGENASE) LENGTH = 241 COMBINED P-VALUE = 1.18e-36 E-VALUE = 3.9e-35 DIAGRAM: 2-[1]-118-[2]-63 [1] 2.6e-21 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++++++++++++++++++ + + 1 MQKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATATAVAAEINQAGGRAVAIKVDVSRRDQVFAAVEQARK [ 1 S + 76 ALGGFNVIVNNAGIAPSTPIESITEEIVDRVYNINVKGVIWGMQAAVEAFKKEGHGGKIVNACSQAGHVGNPELA 2] .1e-22 VYCASKFAVRMLTRSMAMEYAPHGIRVN ++++++++++++++++++++++ +++++ 151 VYSSSKFAVRGLTQTAARDLAPLGITVNGFCPGIVKTPMWAEIDRQCRKRRANRWATARLNLPNASPLAACRSLK HDE_CANTR HYDRATASE-DEHYDROGENASE-EPIMERASE (HDE) LENGTH = 906 COMBINED P-VALUE = 7.65e-34 E-VALUE = 2.5e-32 DIAGRAM: 8-[1]-123-[2]-133-[1]-113-[2]-237-[1]-147 [1] 1.3e-19 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++++ +++++++ ++++++ 1 MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNV [2] 9.7e-14 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++ +++ ++ ++ ++++++ ++++++ + 151 PAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESILPPPMLEKLGPEKVAPLVLYLS [1] 2.8e-24 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++ +++++++++++++++++++ 301 TNEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQ [2] 4.3e-18 SVYCASKFAVRMLTRSMAMEYAPHGIRVN ++++++++++ +++++++ + ++ +++++ 451 NITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHAETAMTLTIFREQDKNLYHADQVAPLL [1] 9.5e-05 KVVLITGCSSGIGKATAKHL ++++ +++ + + 676 FNSGKSQNSFAKLLRNFNPMLLLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDNKSGELI HKEGAKVVV +++ + ++ 751 YSNEATYFIRNCQADNKVYADRPAFATNQFLAPKRAPDYQVDVPVSEDLAALYRLSGDRNPLHIDPNFAKGAKFP AP27_MOUSE ADIPOCYTE P27 PROTEIN (AP27) LENGTH = 244 COMBINED P-VALUE = 2.07e-33 E-VALUE = 6.8e-32 DIAGRAM: 7-[1]-110-[2]-69 [1] 5.4e-20 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++ ++++++++++++++ 1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIG [2] 1.0e SVYC ++ 76 PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS -20 ASKFAVRMLTRSMAMEYAPHGIRVN ++++++++++++++++++++ ++++ 151 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSD HDHA_ECOLI 7-ALPHA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.159) (HSDH) LENGTH = 255 COMBINED P-VALUE = 6.87e-33 E-VALUE = 2.3e-31 DIAGRAM: 11-[1]-116-[2]-70 [1] 2.3e-21 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++ +++++++++++++++++++ 1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQEL [2] 7.3e-19 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++ +++++ +++++ +++++++++++++ 151 NKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIA DHII_HUMAN CORTICOSTEROID 11-BETA-DEHYDROGENASE (EC 1.1.1.146) (11-DH) (11-BETA- HYDROXYSTEROID DEHYDROGENASE) (11-BETA-HSD) LENGTH = 292 COMBINED P-VALUE = 1.29e-32 E-VALUE = 4.3e-31 DIAGRAM: 34-[1]-117-[2]-83 [1] 1.6e-23 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++++++++++++++++++++++ 1 MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV [2] 1.4e-16 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++++++++++++ ++ +++++ ++++++ 151 TVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK FIXR_BRAJA FIXR PROTEIN LENGTH = 278 COMBINED P-VALUE = 3.57e-32 E-VALUE = 1.2e-30 DIAGRAM: 36-[1]-121-[2]-63 [1] 2.7e-18 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++ +++++++++++++ + ++++++ 1 MGLDLPNDNLIRGPLPEAHLDRLVDAVNARVDRGEPKVMLLTGASRGIGHATAKLFSEAGWRIISCARQPFDGER [2] 2.7e-21 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++ +++++ ++++++++++++++++++ 151 APILLAQGLFDELRAASGSIVNVTSIAGSRVHPFAGSAYATSKAALASLTRELAHDYAPHGIRVNAIAPGEIRTD DHGB_BACME GLUCOSE 1-DEHYDROGENASE B (EC 1.1.1.47) LENGTH = 262 COMBINED P-VALUE = 5.93e-32 E-VALUE = 2e-30 DIAGRAM: 7-[1]-121-[2]-76 [1] 1.3e-19 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++ +++++++++++++ +++++ 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGGEAIAVKGDVTVESDVIN [2] 1.1e-19 SVYCASKFAVRMLTRSMAMEYAPHGIRVN ++ +++++++ +++++++++++++++++ 151 KIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEE YINL_LISMO HYPOTHETICAL 26.8 KD PROTEIN IN INLA 5'REGION (ORFA) LENGTH = 248 COMBINED P-VALUE = 2.41e-31 E-VALUE = 7.9e-30 DIAGRAM: 5-[1]-117-[2]-68 [1] 5.8e-23 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++++++++ +++++++ ++ 1 MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQIIKANSGEAIFAKTDVTKREDNKKLVEL [2] 1.1e-15 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++++++++++ +++ ++++ ++++ +++ 151 GAVYGATKWAVRDLMEVLRMESAQEGTNIRTATIYPAAINTELLETITDKETEQGMTSLYKQYGITPDRIASIVA RIDH_KLEAE RIBITOL 2-DEHYDROGENASE (EC 1.1.1.56) (RDH) LENGTH = 249 COMBINED P-VALUE = 2.61e-31 E-VALUE = 8.6e-30 DIAGRAM: 14-[1]-114-[2]-63 [1] 3.7e-21 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++ +++++++++++++++++ +++++++ 1 MKHSVSSMNTSLSGKVAAITGAASGIGLECARTLLGAGAKVVLIDREGEKLNKLVAELGENAFALQVDLMQADQV [2] 1.9e-17 SVYCASKFAVRMLTRSMAMEYAPHGIRVN ++++++++++++++++ +++++++++++ 151 VVPVIWEPVYTASKFAVQAFVHTTRRQVAQYGVRVGAVLPGPVVTALLDDWPKAKMDEALANGSLMQPIEVAESV NODG_RHIME NODULATION PROTEIN G (HOST-SPECIFICITY OF NODULATION PROTEIN C) LENGTH = 245 COMBINED P-VALUE = 1.22e-30 E-VALUE = 4e-29 DIAGRAM: 6-[1]-114-[2]-67 [1] 9.9e-17 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++ ++ ++++ ++++++ + + 1 MFELTGRKALVTGASGAIGGAIARVLHAQGAIVGLHGTQIEKLETLATELGDRVKLFPANLANRDEVKALGQRAE [ 3 S + 76 ADLEGVDILVNNAGITKDGLFLHMADPDWDIVLEVNLTAMFRLTREITQQMIRRRNGRIINVTSVAGAIGNPGQT 2] .5e-21 VYCASKFAVRMLTRSMAMEYAPHGIRVN ++++++++++++++++++++++ +++++ 151 NYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNHKQKEKIMVAIPIHRMGTGTEVASAVAYLAS DHMA_FLAS1 N-ACYLMANNOSAMINE 1-DEHYDROGENASE (EC 1.1.1.233) (NAM-DH) LENGTH = 270 COMBINED P-VALUE = 1.86e-30 E-VALUE = 6.1e-29 DIAGRAM: 14-[1]-119-[2]-79 [1] 1.9e-19 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++++++++++++++++++++++ 1 TTAGVSRRPGRLAGKAAIVTGAAGGIGRATVEAYLREGASVVAMDLAPRLAATRYEEPGAIPIACDLADRAAIDA [2] 2.2e-18 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++ ++++++ +++++++++++++++ ++ 151 GSVNSFMAEPEAAAYVAAKGGVAMLTRAMAVDLARHGILVNMIAPGPVDVTGNNTGYSEPRLAEQVLDEVALGRP HMTR_LEIMA no comment LENGTH = 287 COMBINED P-VALUE = 5.36e-30 E-VALUE = 1.8e-28 DIAGRAM: 6-[1]-155-[2]-68 [1] 4.8e-18 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++ +++++++ ++++++ +++ 1 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVS [2] 2.3e-19 SVYCASKFAVRMLTRSMAMEYAPHGIRVN + +++++++++++++++++++++ +++++ 151 PYFLIKAFAHRSRHPSQASRTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 2BHD_STREX 20-BETA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.53) LENGTH = 255 COMBINED P-VALUE = 6.42e-30 E-VALUE = 2.1e-28 DIAGRAM: 6-[1]-114-[2]-77 [1] 5.3e-18 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++++++ + +++ +++++++++ 1 MNDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR [ 3 S + 76 EEFGSVDGLVNNAGISTGMFLETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTS 2] .2e-19 VYCASKFAVRMLTRSMAMEYAPHGIRVN ++++++++++++++ +++++++ +++++ 151 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL FVT1_HUMAN no comment LENGTH = 332 COMBINED P-VALUE = 5.24e-29 E-VALUE = 1.7e-27 DIAGRAM: 32-[1]-122-[2]-120 [1] 4.0e-18 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++++++++++++++ +++ 1 MLLLAAAFLVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKE [2] 2.0e-18 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++++++++++++ +++++++++++++++ 151 YPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYNVYITVAYPPDTDTPGFA DHB2_HUMAN no comment LENGTH = 387 COMBINED P-VALUE = 7.98e-29 E-VALUE = 2.6e-27 DIAGRAM: 82-[1]-118-[2]-129 [1] 4.4e-18 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++++++++++ + ++ +++ 76 ELLPVDQKAVLVTGGDCGLGHALCKYLDELGFTVFAGVLNENGPGAEELRRTCSPRLSVLQMDITKPVQIKDAYS [2] 2.0e-18 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++++++++++++++ ++++++++++++ 226 MERLASYGSSKAAVTMFSSVMRLELSKWGIKVASIQPGGFLTNIAGTSDKWEKLEKDILDHLPAEVQEDYGQDYI ENTA_ECOLI 2,3-DIHYDRO-2,3-DIHYDROXYBENZOATE DEHYDROGENASE (EC 1.3.1.28) LENGTH = 248 COMBINED P-VALUE = 8.83e-29 E-VALUE = 2.9e-27 DIAGRAM: 5-[1]-107-[2]-78 [1] 1.5e-20 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++++++++++++++++++ 1 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDA [2] 1.8e-15 SVYCASKFA +++++++++ 76 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAA VRMLTRSMAMEYAPHGIRVN ++++ + ++++ ++++++ 151 LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFL BDH_HUMAN D-BETA-HYDROXYBUTYRATE DEHYDROGENASE PRECURSOR (EC 1.1.1.30) (BDH) (3-HYDROXYBUTYRATE DEHYDROGENASE) (FRAGMENT) LENGTH = 343 COMBINED P-VALUE = 3.79e-28 E-VALUE = 1.3e-26 DIAGRAM: 55-[1]-121-[2]-109 [1] 8.6e-19 KVVLITGCSSGIGKATAKHL +++++++++++ ++++++++ 1 GLRPPPPGRFSRLPGKTLSACDRENGARRPLLLGSTSFIPIGRRTYASAAEPVGSKAVLVTGCDSGFGFSLAKHL HKEGAKVVV +++++ +++ 76 HSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQLNVFRSEEVEKVVGDCPFEPEGPEKGMWGLVNNAGISTF [2] 6.5e-17 SVYCASKFAVRMLTRSMAME ++++ +++++++++ +++++ 151 GEVEFTSLETYKQVAEVNLWGTVRMTKSFLPLIRRAKGRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYE YAPHGIRVN +++ +++++ 226 MYPLGVKVSVVEPGNFIAATSLYNPESIQAIAKKMWEELPEVVRKDYGKKYFDEKIAKMETYCSSGSTDTSPVID BA72_EUBSP 7-ALPHA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.159) (BILE ACID 7-DEHYDROXYLASE) (BILE ACID-INDUCIBLE PROTEIN) LENGTH = 249 COMBINED P-VALUE = 8.53e-28 E-VALUE = 2.8e-26 DIAGRAM: 6-[1]-119-[2]-66 [1] 4.8e-19 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++ +++++ ++++++ ++ ++ +++++ + 1 MNLVQDKVTIITGGTRGIGFAAAKIFIDNGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAA [2] 5.4e-16 SVYCASKFAVRMLTRSMAMEYAPHGIRVN + +++++++++++ + +++ ++++++ 151 SLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDMTNGNPPEIMEGYLKALPMKRMLEPEEIANVY 3BHD_COMTE 3-BETA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.51) LENGTH = 253 COMBINED P-VALUE = 3.42e-27 E-VALUE = 1.1e-25 DIAGRAM: 6-[1]-113-[2]-76 [1] 4.8e-19 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++++++++ ++ ++ +++++ + 1 TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQ [2 2. SV + 76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAG ] 1e-15 YCASKFAVRMLTRSMAMEYAPHGIRVN +++++++++++++++++ +++++ ++ 151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQL GUTD_ECOLI SORBITOL-6-PHOSPHATE 2-DEHYDROGENASE (EC 1.1.1.140) (GLUCITOL-6- PHOSPHATE DEHYDROGENASE) (KETOSEPHOSPHATE REDUCTASE) LENGTH = 259 COMBINED P-VALUE = 3.85e-27 E-VALUE = 1.3e-25 DIAGRAM: 2-[1]-120-[2]-79 [1] 1.3e-14 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++ ++++ ++ +++ ++++++++ + 1 MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSCLALSRGV [2] 8.7e-20 SVYCASKFAVRMLTRSMAMEYAPHGIRVN + +++++++ +++++++++++++++++++ 151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGC DHB3_HUMAN no comment LENGTH = 310 COMBINED P-VALUE = 6.16e-27 E-VALUE = 2e-25 DIAGRAM: 48-[1]-118-[2]-86 [1] 3.5e-19 KVVLITGCSSGIGKATAKHLHKEGAKV +++++++++ +++++++ ++++++ ++ 1 MGDVLEQFFILTGLLVCLACLAKCVRFSRCVLLNYYKVLPKSFLRSMGQWAVITGAGDGIGKAYSFELAKRGLNV VV ++ 76 VLISRTLEKLEAIATEIERTTGRSVKIIQADFTKDDIYEHIKEKLAGLEIGILVNNVGMLPNLLPSHFLNAPDEI [2] 3.4e-15 SVYCASKFAVRMLTRSMAMEYAPHGIRVN ++++++++++++++++++ +++ + + ++ 151 QSLIHCNITSVVKMTQLILKHMESRQKGLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVIIQV LIGD_PSEPA C ALPHA-DEHYDROGENASE (EC -.-.-.-) LENGTH = 305 COMBINED P-VALUE = 1.10e-24 E-VALUE = 3.6e-23 DIAGRAM: 6-[1]-119-[2]-122 [1] 6.5e-17 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++ +++++++ ++ +++ + ++++++++ 1 MKDFQDQVAFITGGASGAGFGQAKVFGQAGAKIVVADVRAEAVEKAVAELEGLGITAHGIVLDIMDREAYARAAD [2] 3.7e-15 SVYCASKFAVRMLTRSMAMEYAPHGIRVN ++++++++ +++++ +++ + ++++ ++ 151 SALAGPYSAAKAASINLMEGYRQGLEKYGIGVSVCTPANIKSNIAEASRLRPAKYGTSGYVENEESIASLHSIHQ DHES_HUMAN ESTRADIOL 17 BETA-DEHYDROGENASE (EC 1.1.1.62) (20 ALPHA-HYDROXYSTEROID DEHYDROGENASE) (E2DH) (17-BETA-HSD) (PLACENTAL 17-BETA-HYDROXYSTEROID DEHYDROGENASE) LENGTH = 327 COMBINED P-VALUE = 1.40e-24 E-VALUE = 4.6e-23 DIAGRAM: 2-[1]-50-[1]-42-[2]-146 [1] 3.0e-15 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++++++ +++++ ++ + 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA [1] 6.8e-05 KVVLITGCSSGIGKATAKHLHKEGAKVVV + + ++ ++++ ++ + + + + 76 RERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP [2] 8.7e-17 SVYCASKFAVRMLTRSMAMEYAPHGIRVN ++++++++++++++++++ + + +++ + 151 FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV RFBB_NEIGO no comment LENGTH = 346 COMBINED P-VALUE = 7.85e-22 E-VALUE = 2.6e-20 DIAGRAM: 6-[1]-127-[2]-155 [1] 4.3e-14 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++ ++ + +++ +++ ++ 1 MQTEGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVF [2] 3.4e-15 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++++++++ +++++++++ ++ ++ + 151 DLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDG BPHB_PSEPS BIPHENYL-CIS-DIOL DEHYDROGENASE (EC 1.3.1.-) LENGTH = 275 COMBINED P-VALUE = 2.97e-21 E-VALUE = 9.8e-20 DIAGRAM: 5-[1]-116-[2]-96 [1] 3.8e-15 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++++++ +++++ ++ 1 MKLKGEAVLITGGASGLGRALVDRFVAEAKVAVLDKSAERLAELETDLGDNVLGIVGDVRSLEDQKQAASRCVAR [2] 2.5e-13 SVYCASKFAVRMLTRSMAMEYAPHGIRVN + ++++++++++++++++++++++ + 151 PLYTAAKQAIVGLVRELAFELAPYVRVNGVGPGGMNSDMRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEE DHCA_HUMAN no comment LENGTH = 276 COMBINED P-VALUE = 4.78e-20 E-VALUE = 1.6e-18 DIAGRAM: 4-[1]-157-[2]-57 [1] 3.5e-16 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++++++++++++++++++++ + ++ 1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF [2] 4.5e-11 SVYCASKFAVRMLTRSMAMEYAPHGIRVN ++++ ++ +++ +++ +++ +++++ 151 PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNAC ADH_DROME ALCOHOL DEHYDROGENASE (EC 1.1.1.1) LENGTH = 255 COMBINED P-VALUE = 1.92e-17 E-VALUE = 6.3e-16 DIAGRAM: 6-[1]-114-[2]-77 [1] 7.6e-12 KVVLITGCSSGIGKATAKHLHKEGAKVVV ++++ + +++++ ++++++++ + + 1 SFTLTNKNVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAELKAINPKVTVTFYPYDVTVPIAETTKL [ 1 S + 76 LKTIFAQLKTVDVLINGAGILDDHQIERTIAVNYTGLVNTTTAILDFWDKRKGGPGGIICNIGSVTGFNAIYQVP 2] .1e-12 VYCASKFAVRMLTRSMAMEYAPHGIRVN +++ ++++++++++++++ ++++ + 151 VYSGTKAAVVNFTSSLAKLAPITGVTAYTVNPGITRTTLVHKFNSWLDVEPQVAEKLLAHPTQPSLACAENFVKA PCR_PEA no comment LENGTH = 399 COMBINED P-VALUE = 1.27e-15 E-VALUE = 4.2e-14 DIAGRAM: 86-[1]-284 [1] 1.2e-18 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++++++++++++++++++++ + ++ 76 SSSEGKKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMACRDYLKAARAAKSAGLAKENYTIMHLDLASLDS YURA_MYXXA no comment LENGTH = 258 COMBINED P-VALUE = 1.99e-15 E-VALUE = 6.6e-14 DIAGRAM: 157-[2]-72 [2] 8.3e-18 SVYCASKFAVRMLTRSMAMEYAPHGIRVN + +++++++++ ++++++++++ ++++++ 151 GFRGLPATRYSASKAFLSTFMESLRVDLRGTGVRVTCIYPGFVKSELTATNNFPMPFLMETHDAVELMGKGIVRG MAS1_AGRRA no comment LENGTH = 476 COMBINED P-VALUE = 1.16e-13 E-VALUE = 3.8e-12 DIAGRAM: 245-[1]-115-[2]-58 [1] 7.2e-16 KVVLITGCSSGIGKATAKHLHKEGAKVVV +++++ ++++++++++++++++++++ + 226 GRVLHFRRGFSHWTVEIHQSPVILVSGSNRGVGKAIAEDLIAHGYRLSLGARKVKDLEVAFGPQDEWLHYARFDA [2] 2.3e-05 SVYCASKFAVRMLTRSMAMEYAPHGIRVN + +++ ++ +++++ ++ + 376 NINSMSGQRVLNPLVGYNMTKHALGGLTKTTQHVGWDRRCAAIDICLGFVATDMSAWTDLIASKDMIQPEDIAKL FABI_ECOLI no comment LENGTH = 262 COMBINED P-VALUE = 8.73e-11 E-VALUE = 2.9e-09 DIAGRAM: 6-[1]-121-[2]-77 [1] 5.2e-05 KVVLITGCSSGIGKATAKHLHKEGAKVVV + +++++ ++ + ++ ++ + + + 1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMF [2] 1.1e-12 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++ +++++++ +++++ +++++++++ 151 RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDV CSGA_MYXXA no comment LENGTH = 166 COMBINED P-VALUE = 2.46e-10 E-VALUE = 8.1e-09 DIAGRAM: 85-[2]-52 [2] 5.8e-13 SVYCASKFAVRMLTRSMAMEYAPHGIRVN +++ ++++++ + ++++ ++++++ + 76 SLAANTDGGAYAYRMSKAALNMAVRSMSTDLRPEGFVTVLLHPGWVQTDMGGPDATLPAPDSVRGMLRVIDGLNP ******************************************************************************** CPU: Timothys-iMac.local Time 0.049 secs. mast -oc mast_example_output_files -dl http://www.uniprot.org/uniprot/?query=SEQUENCEID&sort=score adh.meme adh.faa