getsize <sequences> [options]
The program getsize prints statistics about sequences read from a FASTA file.
When counting letters, alias symbols are first converted to their core symbol.
A file in FASTA format. If the filename is given as "-", then the program reads from standard input.
Writes statistics about the sequences to standard output.
|-dna||Assume sequences are DNA and print letter frequencies in background file format.|
|-rna||Assume sequences are RNA and print letter frequencies in background file format.|
|-prot||Assume sequences are protein and print letter frequencies in background file format.|
|-alph||file||Use the alphabet defintion in the specified file and print frequencies in background file format.|
|-f||Print the letter frequences as a C array.|
|-ft||Print letter frequences in a LaTex table.|
|-l||Just print the length of each sequence.|
|-nd||Do not print warnings about duplicate sequences.|
|-x||Translate DNA in 6 frames (use with -f or -ft) and print the protein letter frequencies in one C array for each frame.|
|-codons||As for -x, and also print frame 0 codon usage as a C array.|