meme2meme [options] [<meme motif file>]+
Convert and merge multiple MEME formatted files into a single minimal meme format file.
A motif file in one of the formats output by MEME or DREME.
|-consensus||Numeric names are swapped for an IUPAC consensus.||The original names are used.|
|-forceurl||MEME motifs may already have URLs embedded but this option causes them to be replaced by the URL passed to -url.||Existing URLs are kept.|
|-xalph||Convert all motifs to use the same alphabet as specified in the first motif file. The alphabet specifed in the first motif file must contain a superset of all the core symbols in the other motif file alphabets.||All motif files must use the same alphabet.|