Sequence Databases

Let us know if the database or database version you are looking for is not here and we will try to to add it. Contact us at: meme-suite@uw.edu

Click a category to show its available databases. Within a category click a database to see details.

Ensembl Bacteria Genomes and Proteins (31332 databases)

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Ensembl Fungi Genomes and Proteins (1282 databases)

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Ensembl Metazoa Genomes and Proteins (250 databases)

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Ensembl Plants Genomes and Proteins (150 databases)

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Ensembl Protists Genomes and Proteins (237 databases)

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Ensembl Vertebrates Genomes and Proteins (317 databases)

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Ensembl Vertebrates Proteins (Ab Initio) (300 databases)

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GenBank Bacteria Genomes and Proteins (2773 databases)

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GenBank Fungi Genomes and Proteins (24 databases)

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Other Databases (4 databases)

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Other Genomes (4 databases)

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UCSC Deuterostome Genomes (3 databases)

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UCSC Insect Genomes (13 databases)

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UCSC Mammal Genomes (61 databases)

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UCSC Nematode Genomes (6 databases)

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UCSC Other Genomes (2 databases)

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UCSC Vertebrate Genomes (21 databases)

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UCSC Virus Genomes (2 databases)

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Upstream Sequences: Fungi (241 databases)

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Upstream Sequences: Metazoan (90 databases)

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Upstream Sequences: Plants (172 databases)

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Upstream Sequences: Prokaryotes (9638 databases)

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Upstream Sequences: Protists (22 databases)

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