fasta-io [options] <sequence file>
This utility reads a sequence file in FASTA format and writes it to standard output. It serves no purpose other than testing the FASTA reading code.
The name of a file containing a set of sequences in FASTA format.
The program prints to standard output.
| Option | Parameter | Description | Default Behavior |
|---|---|---|---|
| General Options | |||
| -blocksize | n | Read sequences in blocks of size n. | Read one full sequence at a time. |
| -dna | Sets alphabet to DNA. | The protein alphabet is used. | |
| -many | Read all sequences into memory at start up. | ||