meme2images

Usage:

meme2images [options] <motif file> <output directory>

Description

Generates EPS or PNG logo images from a <motif file> MEME Motif Format.

Input

<motif file>

The name of a file in MEME Motif Format.

<output directory>

The name of a directory to receive the output.

Output

Writes logo images to the specified <output directory>.

Options

Option Parameter Description Default Behavior
General Options
-motifID Output the logo for the motif with the given ID. This option can be repeated to selectively output multiple motif logos. Logos for all motifs are output.
-eps Output logos in EPS format. If neither -eps or -png is specified then output images in both EPS and PNG format.
-png Output logos in PNG format. If neither -eps or -png is specified then output images in both EPS and PNG format.
-rc Output reverse complemented logos in addition to the normal logos. Only output normal logos.