nmica2meme

Usage:

nmica2meme [options]

Description

Convert a nestedMICA (BioTiffin/XMS) matrix file into a MEME motif file suitable for use with MEME Suite programs.

Input

Reads a nestedMICA (BioTiffin/XMS) matrix file from standard input.

See the Sample XMS file from Benos lab, University of Pittsburgh

Output

Options

Option Parameter Description Default Behavior
General Options