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Version 3.0

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Data Submission Form

Use this form to submit motifs to MAST to be used in searching a sequence database. Your data will be processed at the San Diego Supercomputer Center and the results will be sent to you via e-mail.
Your e-mail address: Your motif file:
Sample DNA motif, right click and "save target as" to download
Sequence database to search--select one of the following:
  • A MAST database:
  • Your FASTA sequence file (1,000,000 sequence characters maximum):
    Sample DNA sequence, right click and "save target as" to download.
     

OPTIONS
Scale motif display threshold by sequence length; recommended for nucleotide searches Description of your motifs:
Use individual sequence composition
in E- and p-value calculation
Display sequences with E-value below:
Text output format Rank of the first match returned:
Ignore motifs if E-value above:

DNA-ONLY OPTIONS
Search nucleotide database with protein motifs Treatment of reverse complement strands:

     

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Please send comments and questions to: meme@nbcr.net.