The MEME Suite

Motif-based sequence analysis tools

---

Notice

As of 9AM April 25 PDT the MEME Suite server still has over 2400 jobs waiting to run. This is far above our normal workload, and it will take several days to work through the backlog.

Despite our previous request, jobs have continued to be submitted. As a result we are forced to disable job submission. You should still be able to access the results of your jobs as they are completed.

We will restore job submission onced the backlog has reached a reasonable level.

---

MEME Multiple Em for Motif Elicitation	SEA Simple Enrichment Analysis	FIMO Find Individual Motif Occurrences
STREME Sensitive, Thorough, Rapid, Enriched Motif Elicitation	AME Analysis of Motif Enrichment	MAST Motif Alignment & Search Tool
XSTREME Motif Discovery and Enrichment Analysis	CentriMo Local Motif Enrichment Analysis	MCAST Motif Cluster Alignment and Search Tool
MEME-ChIP Motif Analysis of Large Nucleotide Datasets	SpaMo Spaced Motif Analysis Tool	GLAM2Scan Scanning with Gapped Motifs
GLAM2 Gapped Local Alignment of Motifs	GOMo Gene Ontology for Motifs	T-Gene Predicting Target Genes
MoMo Modification Motifs	Tomtom Motif Comparison Tool	GT-Scan Identifying Unique Genomic Targets
BED2FASTA Convert BED file to FASTA	DREME Discriminative Regular Expression Motif Elicitation

---

Development of the MEME Suite was funded by grant R01 GM103544 from the National Institutes of Health.

---

Developed and maintained by

---