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GT-Scan finds optimal targets for genome editing or regulatory interference using CRISPR/Cas or zinc-finger nuclease systems.

The MEME Suite

MEME Multiple Em for Motif Elicitation	SEA Simple Enrichment Analysis	FIMO Find Individual Motif Occurrences
STREME Sensitive, Thorough, Rapid, Enriched Motif Elicitation	AME Analysis of Motif Enrichment	MAST Motif Alignment & Search Tool
XSTREME Motif Discovery and Enrichment Analysis	CentriMo Local Motif Enrichment Analysis	MCAST Motif Cluster Alignment and Search Tool
MEME-ChIP Motif Analysis of Large Nucleotide Datasets	SpaMo Spaced Motif Analysis Tool	GLAM2Scan Scanning with Gapped Motifs
GLAM2 Gapped Local Alignment of Motifs	GOMo Gene Ontology for Motifs	T-Gene Predicting Target Genes
MoMo Modification Motifs	Tomtom Motif Comparison Tool	GT-Scan Identifying Unique Genomic Targets
BED2FASTA Convert BED file to FASTA	DREME Discriminative Regular Expression Motif Elicitation