MEME Suite Releases

The MEME Suite container is available under a limited, non-commercial use license. See the license details here. Information about commercial licensing is available here.

You can dowload and install the MEME Suite software in three different ways:

1. As a containerized Docker app for macOS or Windows by clicking here. The Docker container includes the current Motif and GOMo databases, but not the T-Gene database or sequence databases.
2. On macOS using MacPorts. If you have MacPorts installed, run port install memesuite to download and install the MEME Suite command line tools.
3. As source code for macOS, Linux, or Windows Subsystem for Linux. The source code releases are listed below, newest to oldest.

Databases

These are the motif databases, GOMo seqence databases, T-Gene Histone+Expression databases and some of the genome sequence databases used on the MEME Suite website.

• Motif Databases (updated 13 Jan 2024)
• GOMo Databases (updated 17 Feb 2015)
• T-Gene Databases (updated 12 Oct 2019)
• Show/Hide Sequence Databases (updated 15 Oct 2022)

  You can obtain sequence databases for use with your locally installed MEME Suite website in two ways.

  1. You can run the update-sequence-db provided with your locally installed version of the MEME Suite to download the same groups of genomes, proteomes and upstream sequences provided on the official MEME Suite Website.
  2. You can download one or more of the genome archives listed below and uncompress them. The archives in the table can be quite large; the Size column shows the download size and the uncompressed size in bytes. Refer to the installation instructions for installing MEME Suite from source or using Docker for how to make your chosen sequence database archive visible to your local MEME Suite website.

  Archive Name	Archive Contents	Size	Download
  Human	hg16, hg17, hg18, hg19, hg38	4.4G / 15G	fasta_human.tgz
  Mouse	mm7, mm8, mm9, mm10, mm39	4.0G / 13G	fasta_mouse.tgz
  Rat	rn3, rn4, rn5, rn6, rn7	4.0G / 14G	fasta_rat.tgz
  Frog	xenTro1, xenTro2, xenTro3, xenTro7, xenTro9, xenTro10	2.5G / 8.6G	fasta_frog.tgz
  Zebrafish	danRer3, danRer4, danRer5, danRer6, danRer7, danRer10, danRer11	3.2G / 10G	fasta_zebrafish.tgz
  Drosophila	dm1, dm2, dm3, dm6	184M / 672M	fasta_fly.tgz
  Worm	ce2, ce4, ce6, ce10, ce11	166M / 601M	fasta_worm.tgz
  Yeast	sacCer1, sacCer2, sacCer3 and Schizosaccaromyces Pombe	30M / 164M	fasta_yeast.tgz
  Arabidoposis thaliana	TAIR10	58M / 262M	fasta_arabidopsis.tgz
  Rice	IRGSP-1.0	133M / 499M	fasta_rice.tgz
  Model Organisms	Three newest versions of above genomes	11G / 35G	fasta_model_organisms.tgz

MEME Suite Software

These releases include the complete source code of the MEME Suite which can be compiled to run on OS X or Linux. They can be compiled on a Windows PC using a virtual machine (running Linux) or the Windows Subsystem for Linux.

Whenever possible use the patched version of the newest release otherwise refer to the readme (or patch readme) for patch installation instructions.